PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_20128
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 152aa    MW: 17239.3 Da    PI: 10.0772
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_20128genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-201261255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+W+AeIrdp   + + +r++lg+f tae Aa a+++a++k++g
  PEQU_20128 12 HYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFETAEAAAIAYDNAALKFKG 61
                8********.**********9...3.35************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.22E-241170No hitNo description
Gene3DG3DSA:3.30.730.103.1E-331170IPR001471AP2/ERF domain
PfamPF008471.9E-131261IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-231270IPR016177DNA-binding domain
PROSITE profilePS5103224.8291269IPR001471AP2/ERF domain
SMARTSM003801.7E-381275IPR001471AP2/ERF domain
PRINTSPR003671.0E-111324IPR001471AP2/ERF domain
PRINTSPR003671.0E-113551IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MHEGSEKEKK KHYRGVRQRP WGKWAAEIRD PNKAARVWLG TFETAEAAAI AYDNAALKFK  60
GKRAKLNFPE RVQNSDMFMN DRGILITQQN HQSSISTSDL ALYESQASTI SFASPSQQSF  120
APEVMLNFGD YDSGSYSRPK RAKGEYSRKD II
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-28976270ATERF1
3gcc_A1e-28976270ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007139323.11e-38hypothetical protein PHAVU_008G019600g
TrEMBLV7B0A22e-38V7B0A2_PHAVU; Uncharacterized protein
STRINGSolyc06g068830.1.11e-36(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.11e-30ERF family protein